Gene ID: Cha_1G0000090.1
- Transcript_id: Cha_1G0000090.1
- Location: chr1:115378-118212
- Strand: -
- Length: 944
NR
- IDGFH61667.1
- Annotationhypothetical protein CTEN210_18143 [Chaetoceros tenuissimus]
SwissProt
- ID--
- Annotation--
TrEMBL
- IDtr|A0A7S3Q670|A0A7S3Q670_9STRA
- AnnotationUncharacterized protein OS=Chaetoceros debilis OX=122233 GN=CDEB00056_LOCUS11646 PE=4 SV=1
GO
- IDsGO:0005515
- Annotationmolecular_function protein binding
Pfam
- IDs--
- Annotation--
InterPro
- IDsIPR002110;IPR036770
- AnnotationAnkyrin repeat | Ankyrin repeat-containing domain superfamily
KOG
- ID--
- Defination--
- Code--
KEGG
- Gene Name--
- Pathway--
- Pathway Defination--
KO
- ID--
- Link--
TF
- ID--
- Link--
TargetP
- PredictionOTHER
- Other--
- SP0.000517
- MTP0.397848
- CTP0.011029
- LTP0.000092
- CS Position--
SignalP
- SignalPN
- D score0.105
- Cleavage positionNA
- 25aa cleavage scoreNA
- 25aa sequenceNA
ASAFind
- Cleavage positionNA
- 25aa cleavage scoreNA
- 25aa sequenceNA
- cleavage has [FWYL] at +1 positionNA
- SignalP cleavage site offsetNA
- 20aaTransitScoreNA
- PredictionNot plastid, SignalP negative
HECTAR
- Signal peptide score0.0667
- Signal peptide cleavage site-
- Type II signal anchor score0.0245
- Chloroplast score-
- Mitochondrion score0.1287
- Other score0.8713
- Predicted targeting categoryother localisation
TMHMM
- Length944
- Exp number of AAs in TMHs0.28
- Exp number, first 60 AAs--
- Number of predicted TMHs--
- Topologyo
Sequence
ATGTCCCGGTCTTGGCTTCAAGTGACGCAAAGGGCTCAAACTCATCCGCAAGAAGCGCAGTATGGGTGCTCATCCTCGGGGAACAAAACACCAGTGAATTTGAAACTGAATCCCTCTTTGGCAAATTCTTCTTCTCCTCTTGCCATTGCATGTCGATACGGTGCTCCACCCGAAACTGTTGAGGCCATTTTAGAGGCTGAAAAGAGCATGGTGCGTAGGTGCATACCCAATCGAGGTACGCCCCTACATGAGGCCATTATGGCATATCCCAACTTGGAAGGGACAAATAAAATGGGAATTTCCACGACTGACGATAGGAGGAATGCCAACTCTCCGATTGCTTGCAATGACACGTCTTGGACTCCGGGACTACGAGATGGCTACCATTTCTATCGACCCTATGTGGAAGTTATACGATTGTTGCTAAGGGCTGATGAACAATTAGAGCACAAGGAAGAATCCTATTGTGATTACAATCAAACCAGAGCTACGCTTCTTCAAGATGTTGATGGAAACGTACCTCTTCACTTGTTGGTGAGACAGGCATTTTATAATTATATTGGTGGAATGTCCACACATGTACAGCAGCCGTCGCCTCCAAGTGAATCAACAACAAGTCGCAATGATGATCGTCATAAACAGCAGCAGCAGCAGCAGCAGCATCCATTGCTTTCCATAATATATGATGTCATAGAATCAAGCCCTGAAGCATGTGCCATGCCCGATTTCACAGAATTTGAAGAAACACCACTTGTCCTTGTACTCAAGTCGAGTATATATGCCAATGAGCAACATTCTCAAACACAGCTACAAACTTTCGAGGATGCTTCCCCCAACTCAGAGCTCAATTACAATTCTGAATTTGAATGGAGAATTTTTGAGCTGTGCAAAATAATGCTTGATAAAAATCCATATGCTGCATCATTTGCTGCATCCAAAAGTAAACATACTGCAGTGCATTCTGCTGTTTTTCATGGTAGATGCTGCGACACAATACGTCTCCTATTGAAGGCTGATTCTCTGCACAGGGAACAAATGGAAGCTAACATGGAGATTGACAATGCCAAGGAAAATCAGCTGCATGATATTCCACCACCAGCAGCTATGAGACCCAATCGCTTCGGAGAAACACCTCTACACTTTGCTGCAATGAGAGGAGAATGCACTAGGACCATCAAGTTACTATCTCAAGAAGCACCTTGGGCTGCTCTCAAGAGAGATATAAAGTACGGGATGACGCCGCTGCATTGGTTAAGTGTACGTTTTGTAGATGTGATGTTTGAAAGATTTCGACATCGAAGTTTTCAAGTTCCAGAGGCTTCCCAAAACTTCGACCATGACATCGATTTTAGTCAGTGTTATATTCATGACCATCATGATTTTTATAAATCAGATGATGTTCTAAGTTTACTAACAGACATGTCTGAAAGTGGTGGTTCGACCCAAAATGATAGTGCATCTAGCTGTAGAATAGAGAACAACCAAGAAGGCATAGAGTTTGATTTTGAGTATCATAGAAGAACAGGTGCCATTGACCCACCAGTTAACTATATGAGAATGAGGCACATACTTCCAGAGCATGATCAATTTAAACATTTATTGATGAATAGAGTGAGCTCAGTTCTCATGCGAGTGAGAGAGAGACATTGGAAGCTTATAGAATCCATAAAAAATGTAGCCGCACAGGATCACCACCAAAAGAGAAATCCTAACGACGGAGAAACAGTAGGTGATCATTCGGAAGACCACAGGGGCTCTGGATCAATATTTGGCAATCGTAATCAGTGTCCCTTCTCAAAAGATATGAGTCATACTAGAGATGTTCCAAGTCCCTATCCTTCCTCTATGACTGATGCACAGAGAATTCAATGTCCTGCATCCACTTTGCGTTTAGATTCGGAGTCATTTACTGATCATTTCGTACCACATCGACAAGACCAACACGAGCAAATGCACAGGACAGATCATGTTGCCGCCGAGAGAAAGAAATGTCCGTTCCGCTGTCCATTTGTTTTTGATTCATATCCAATTGCTTCTTCAGTGATAACTTTGGAGCAAAAAGATGCAGTTGTAGAAGAACAGGTGATTTCATTATTTTGGGCAAAGGTGACGTCACTCATTCATGCTGCAGCGAGTACAAAAGTGTCAAATCAAGAGATCGGCCATTTGAATACCAAATGTCCCGTTGATGAATACAGTAGAGAATACATGTTGCACACCGCATGTTCATCACCATGTCCTTTTGAAATTGTTCGTCTCATTTTGAATCTCTATCCGGAGCAGCTCCATATTCAGGACACGTATGGGAAGCTACCTCTTCACCATGCAGCCTCTCGCAAATGGAACCCCCGAGAGTTTGACAAAATCTTAGTAGCAAATAATACAATGATGAACTCGTCAAACCTTATCCATGAAGAATCCGCAAAAGCCTTACGCCTAATCATTCAAGAGAGTTCAAAGACCGCCATGAACGTTTGTGATTGTGAGAATAGATTACCTTTTCATCATGCAATTGATTCAATGGTTCAAGCAGTCGTTGATTATCCATTTAGAGAACAACAACCAAGGCACCATGAAAATCCTGAAGCCAATGATGCGACATTATTTTCTGTAATAGAACTGTTAAGGCTCATGATAAGTATCAGTCCCGAGACAGTGGAGAAGAGAGATGGGAAGACAGGGCTATTTCCTTTTATGCAAGTAGTATCCACTGCATCAGAAAGATTAGGAAAGTATCACAAGCAAAAACGAAGCAACTCGATCACTATATCACTTACCTATTGTCTGCTTCTTGAAAATCCGTCACTAGCAGTAACTTATGGCATGGTGAATTGA
Expression (RNA-Seq)
| Comparison | ||
| Mean | 0 | 0 |
| Deviation | 0 | 0 |
| Log2FoldChange | NaN | |
| P-value | NaN | |